Package: fracprolif 1.0.7
fracprolif: Fraction Proliferation via a Quiescent Growth Model
Functions for fitting data to a quiescent growth model, i.e. a growth process that involves members of the population who stop dividing or propagating.
Authors:
fracprolif_1.0.7.tar.gz
fracprolif_1.0.7.zip(r-4.7)fracprolif_1.0.7.zip(r-4.6)fracprolif_1.0.7.zip(r-4.5)
fracprolif_1.0.7.tgz(r-4.6-any)fracprolif_1.0.7.tgz(r-4.5-any)
fracprolif_1.0.7.tar.gz(r-4.7-any)fracprolif_1.0.7.tar.gz(r-4.6-any)
fracprolif_1.0.7.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
fracprolif/json (API)
| # Install 'fracprolif' in R: |
| install.packages('fracprolif', repos = c('https://spgarbet.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/spgarbet/fracprolif/issues
- ca1d.erlotinib - CA1d cells in 16 micromolar erlotinib
- ca1d.erlotinib.totals - CA1d cell counts in various concentrations erlotinib
Last updated from:c5eb277a7e. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 100 | ||
| source / vignettes | OK | 143 | ||
| linux-release-x86_64 | OK | 99 | ||
| macos-release-arm64 | OK | 119 | ||
| macos-oldrel-arm64 | OK | 127 | ||
| windows-devel | OK | 78 | ||
| windows-release | OK | 104 | ||
| windows-oldrel | OK | 97 | ||
| wasm-release | OK | 84 |
Exports:.requireCachedGenericsprolif_dprolif_fdprolif_fqprolif_qprolif_totq.mle.emg.estimateq.mle.norm.estimateq.ratesqsurvival.nlliksplit_dsplit_fdsplit_fqsplit_qsplit_tot
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Fractional Proliferation. | fracprolif-package fracprolif |
| CA1d cells in 16 micromolar erlotinib | ca1d.erlotinib |
| CA1d cell counts in various concentrations erlotinib | ca1d.erlotinib.totals |
| Expected Propagating Subpopulation | prolif_d |
| Fraction of Population Propagating | prolif_fd |
| Fraction of Population Quiescent | prolif_fq |
| Expected Quiescent Subpopulation | prolif_q |
| Expected Proliferation Total | prolif_tot |
| Estimate Distribution Parameters based on EMG survival | q.mle.emg.estimate |
| Estimate Distribution Parameters based on EMG survival | q.mle.norm.estimate |
| Estimate Quiescence-Growth Model Rates | q.rates |
| Class '"qrate"' | qrate-class show,qrate-method summary,qrate-method |
| Negative Log-Likelihood of a Survival Function | qsurvival.nllik |
| Piecewise curves for rates which change in the middle of an experiment | split_d split_fd split_fq split_q split_tot |
